View our recent software releases. Software developed within the Row Fogo Centre to facilitate neuroimaging analysis.IMPORTANT NOTE: You are free to use developed by us tools for research purposes. Hovewer, please include adequate citations and acknowledgments whenever you present or publish results that are based on it.Assessment of perivascular space filtering methods using a three-dimensional computational model: source codeCitation: Bernal, Jose; Valdés-Hernández, Maria D C; Escudero, Javier; Duarte, Roberto; Ballerini, Lucia; Bastian, Mark E; Deary, Ian J; Thrippleton, Michael J; Touyz, Rhian M; Wardlaw, Joanna M. (2025). Assessment of perivascular space filtering methods using a three-dimensional computational model: source code, [software]. University of Edinburgh. Centre for Clinical Brain Sciences. https://doi.org/10.7488/ds/7915.Link to software release: Assessment of perivascular space filtering methods using a three-dimensional computational model: source code Probabilistic Deep Learning with Adversarial Training and Volume Interval Estimation - Better Ways to Perform and Evaluate Predictive Models for White Matter Hyperintensities EvolutionAuthors: Muhammad Febrian Rachmadi (RIKEN Center for Brain Science, Japan)Topics: deep-neural-networks deep-learning brain-mri wmh-segmentation wmhs GitHub link (external website) Algorithm developed as a part of collaborathion between RIKEN Center for Brain Science (Japan), School of Informatics, and the Row Fogo Centre fore Research into Ageing and the Brain, at The University of Edinburgh (UK). Read more about RIKEN collaboration Ischaemic Stroke Lesions Segmentation using Convolutional Neural Networks Authors: Carlos Uziel Perez Malla MSc. work supervised by Maria del C. Valdés Hernandez and Taku Komura GitHub link (external website) Limited-One Time Sample-Irregularity Age Map for GPU (LOTS-IAM GPU)Authors: Febrian Rachmadi, Maria del C. Valdés Hernandez and Taku Komura GitHub link (external website) Dilated Saliency UNetAuthors: Yunhee Jeong MSc work supervised by M. Febrian Rachmadi, Maria del C. Valdés Hernández and Taku Komura GitHub link (external website) Dynamic Brain MRI Analysis Authors: José Bernal Moyano and Maria del C. Valdés Hernández GitHub link (external website) Functions for processing DCE-MRI data and performing simulationsAuthor: Dr Michael Thrippleton GitHub link (external website) Fit T2 or T2 Star MRI data and create parameters mapsAuthor: Dr Michael Thrippleton GitHub link (external website) Functions for processing MT Saturation imagesAuthor: Dr Michael Thrippleton GitHub link (external website) Process T1 mapping using DESPOT1-HIFI or Variable Flip Angle methodsAuthor: Dr Michael Thrippleton GitHub link (external website) T1 mapping using IRSE methodAuthor: Dr Michael Thrippleton GitHub link (external website) See also Row Fogo Centre - Our research Row Fogo Centre Small Vessel Disease Research- Edinburgh Research Explorer (ex… Vascular Assessment and Measurement Platform for Images of the REtina (VAMPIRE) algorithmsAlgorithms developed within the VAMPIRE project, related to quantification of retinal vessel properties. VAMPIRE Project website - Tools (external link) This article was published on 2024-08-27
